Metatranscriptomic Profiling Reveals Species-Level Microbial Shifts and Metabolic Remodeling in Feline Oral Inflammatory Disease

This study utilized ultradeep metatranscriptomic sequencing of 33 cats to demonstrate that feline oral inflammatory diseases are driven not by single pathogens but by community-wide metabolic remodeling involving shifts in species activity and the upregulation of stress, amino acid, and nitric oxide/polyamine metabolic pathways.

Shaw, C., Soltero-Rivera, M., Profeta, R. + 5 more2026-03-10🦠 microbiology

The microbiota impacts life history traits and mating success in male Aedes aegypti mosquitoes

This study demonstrates that manipulating the microbiota of male *Aedes aegypti* mosquitoes—specifically through axenic or monoxenic conditions—significantly enhances their longevity and mating efficiency in non-competitive settings, offering valuable insights for optimizing mass-rearing strategies for arbovirus control programs.

El-Dougdoug, N. K., Magistrado, D., Perry, K. I. + 1 more2026-03-10🦠 microbiology

Evaluating the Utility of a Nanoscale Flow Cytometer for Detection of Surface Proteins on HIV and Extracellular Vesicles

This study demonstrates that the CytoFLEX nano flow cytometer offers significantly improved scatter sensitivity compared to the conventional CytoFLEX S, enabling the detection of smaller viruses and previously undetectable extracellular vesicles within HIV preparations while maintaining comparable performance for surface protein labeling.

Burnie, J., Ouano, C., Costa, V. + 5 more2026-03-10🦠 microbiology

Vancomycin tolerance and dispersion of dual species biofilms of Clostridioides difficile and Vancomycin-resistant Enterococcus faecium

This study demonstrates that while Vancomycin-resistant *Enterococcus faecium* (VRE) inhibits *Clostridioides difficile* biofilm formation in the presence of fermentable glucose, stable dual-species biofilms can be established using non-fermentable sugars without altering vancomycin tolerance, and both single and dual-species biofilms can be dispersed through a nutrient step-change.

Neubauer, H. R., Joseph, S., Ahmad, I. + 1 more2026-03-10🦠 microbiology

Differential impacts of fall versus spring prescribed burns on microbial biomass, richness, and composition in young mixed conifer forests

This study demonstrates that while both fall and spring prescribed burns in young mixed conifer forests promote the succession of fire-loving microbes, fall burns cause significantly greater and more prolonged reductions in soil microbial abundance and richness compared to spring burns.

Zhilik, B. B., Pulido Barriga, M. F., Homyak, P. M. + 2 more2026-03-10🦠 microbiology

The human gut microbiome activity is resilient and stable for up to six months: a large stool metatranscriptomic study

This large-scale metatranscriptomic study of 6,157 individuals demonstrates that the human gut microbiome exhibits remarkable temporal stability over periods ranging from hours to three years and rapidly recovers from major perturbations like colonoscopy preparation within one week, validating stool-based RNA sequencing as a robust tool for longitudinal health research.

Toma, R., Hu, L., Shen, N. + 4 more2026-03-10🦠 microbiology

Establishment of a Long-Term Germ-Free Medaka Model Reveals Microbiota-Dependent Regulation of Growth, Immunity, and Metabolism

This study establishes a long-term germ-free medaka model to demonstrate that while gut microbiota are essential for normal growth, immunity, and metabolism, sterile gut-derived metabolites can only partially rescue these deficits by enhancing specific metabolic pathways without fully restoring long-term survival or organ development.

Jia, P.-P., Wu, M.-F., Ma, L.-P. + 4 more2026-03-10🦠 microbiology

Bacillus velezensis GFZF-23 Alleviates Colitis through Microbiome Restoration and β-Sitosterol-Mediated Metabolic Reprogramming

This study demonstrates that *Bacillus velezensis* GFZF-23 alleviates colitis by restoring microbiome homeostasis in conventional hosts and directly reprogramming host metabolism via β\beta-sitosterol in germ-free conditions, utilizing a reverse screening platform to disentangle these distinct therapeutic mechanisms.

Liu, X.-R., Zhang, C.-C., Huang, Z.-S. + 5 more2026-03-10🦠 microbiology

Advancing Vibrio genetics: A platform for efficient genomic manipulation

This study presents a versatile and efficient genetic platform for non-model *Vibrio* species, utilizing RecA-mediated homologous recombination with dual counterselection systems (galK/DOG-2 and rpsL/streptomycin) and specialized vectors to enable targeted gene disruption, heterologous expression, and functional characterization of this ecologically and medically important bacterial genus.

Tatum, J., Kraieski, N., Hamborg, M. E. + 4 more2026-03-10🦠 microbiology

HtPIP: High-Throughput Phage Isolation Platform increases diversity and reduces isolation time using multiple bacteria

The authors developed the High-Throughput Phage Isolation Platform (HtPIP), a scalable method using 0.2-micron filter plates that significantly reduces isolation time and cost while capturing a more diverse library of novel DNA and RNA phages across multiple bacterial genera compared to traditional low-throughput methods.

Diaz, B., House, T., Padala, M. + 2 more2026-03-10🦠 microbiology

Context-dependent effects of antimicrobial coatings on microbial load and bacterial community composition on public high-touch surfaces

This multisite field study demonstrates that the real-world efficacy of antimicrobial coatings on public high-touch surfaces is highly context-dependent and cannot be reliably predicted by laboratory testing alone, with copper showing the most consistent performance while other materials like silver and SiQAC exhibited variable or negligible effects across different environments.

Kaur, H., Kaura, R., Tirik, K. + 11 more2026-03-09🦠 microbiology

Genomic Determinants of Phage Activity Against Pseudomonas aeruginosa: Roles of Receptors, Defence Systems, and Anti-Defences

This study systematically identifies key genomic determinants, including receptor-binding proteins and anti-defence systems, that govern phage infectivity against *Pseudomonas aeruginosa* and leverages these features to train a machine-learning model that accurately predicts phage-host outcomes for the rational design of robust phage therapeutics.

Vaitekenas, A., Malajczuk, C. J., Mantjani, L. + 8 more2026-03-09🦠 microbiology