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Sea cucumbers influence coral growth and alter sediment-associated prokaryotic communities on a Caribbean reef

A six-week field experiment on Little Cayman demonstrates that the sea cucumber *Holothuria mexicana* significantly enhances the linear growth of staghorn coral (*Acropora cervicornis*) and substantially restructures sediment-associated prokaryotic communities through digestion, despite causing no detectable changes in bulk sediment organic content.

Original authors: Leon R. Schlenger, Leah Harper, Sarah A. Gignoux-Wolfsohn, Cara A. Gallagher, Caroline C. DeSouza, Julia G. McDonough, Victoria E. Mann, Matt L. Doherty

Published 2026-09-28
📖 5 min read🧠 Deep dive

Original authors: Leon R. Schlenger, Leah Harper, Sarah A. Gignoux-Wolfsohn, Cara A. Gallagher, Caroline C. DeSouza, Julia G. McDonough, Victoria E. Mann, Matt L. Doherty

Original paper licensed under CC BY 4.0 (https://creativecommons.org/licenses/by/4.0/). ⚕️ This is an AI-generated explanation of a preprint that has not been peer-reviewed. It is not medical advice. Do not make health decisions based on this content. Read full disclaimer

Coral reefs are among the most vibrant and complex ecosystems on our planet, yet they are under constant pressure from a warming climate, pollution, and overfishing. To survive and recover, these underwater cities rely not just on the corals themselves, but on the intricate web of life that surrounds them. One often overlooked group of animals plays a critical role in this hidden world: sea cucumbers. These slow-moving creatures act as the reef's sanitation crew, constantly eating sand and sediment to extract tiny bits of organic matter. As they process this material, they change the chemical makeup of the seafloor and shuffle the microscopic communities of bacteria living within the sand. While scientists have long suspected that this activity helps keep reefs healthy, the specific ways in which these animals interact with corals in the Caribbean have remained a mystery. Understanding these hidden connections is vital, because if we lose the creatures that maintain the reef's foundation, the corals themselves may struggle to rebuild.

A team of researchers set out to solve this puzzle on the island of Little Cayman, focusing on a common species known as the donkey dung sea cucumber and a fast-growing coral called staghorn coral. They wanted to know if the presence of these sea cucumbers actually helps the coral grow faster, and if the creatures' digestive processes change the bacteria living in the sand. To find out, the scientists built eighteen small, cage-like enclosures on the sandy bottom of the reef. Inside each cage, they placed a small piece of staghorn coral. They then divided these cages into three groups. In the first group, they placed a sea cucumber inside the cage with the coral. In the second group, they built a cage that kept the sea cucumber out but still enclosed the coral. The third group had no cage at all, serving as an open control where the coral was exposed to the natural flow of the ocean.

Over a period of six weeks, the team monitored how much the coral grew. They took photographs and measured the length of the coral fragments to track their progress. The results showed a clear difference. The coral fragments that were enclosed with the sea cucumber grew significantly faster than those in the open cages without any sea cucumber. The coral in the cages that excluded the sea cucumber grew at a rate somewhere in between the two, suggesting that the cage itself might have had a small effect, but the presence of the sea cucumber provided a distinct boost. This finding suggests that the sea cucumber is doing something beneficial for the coral, perhaps by recycling nutrients or altering the water chemistry in a way that helps the coral build its skeleton.

However, the researchers also looked at the sand itself to see if the sea cucumber was simply eating away the organic matter, leaving the sediment cleaner. They measured the amount of organic material in the sand at the beginning and end of the experiment. Surprisingly, the total amount of organic matter in the sand did not change, regardless of whether a sea cucumber was present or not. This indicates that the sea cucumber is not acting as a vacuum cleaner that removes bulk organic material from the reef floor. Instead, its influence is more subtle and chemical. The sea cucumber is likely transforming the nutrients within the sediment rather than removing them entirely.

To understand this transformation, the scientists examined the microscopic life within the sediment and the waste produced by the sea cucumber. They collected samples of the sand and the sea cucumber's feces to analyze the communities of bacteria living there. The results revealed a dramatic shift in the microbial world. The bacteria found in the sea cucumber's waste were very different from those in the surrounding sand. The waste had far fewer types of bacteria, showing a much lower diversity than the sand. While the sand contained a wide mix of bacterial families, the waste was dominated by a specific group of bacteria known as Vibrionaceae. This family of bacteria is common in the ocean and includes both harmless species and those that can cause disease in corals, though the study did not determine which specific types were present.

The researchers concluded that the sea cucumber acts as a powerful filter and processor of the reef's microbial community. By digesting the sediment, it strips away many of the bacterial families found in the sand and enriches the environment with a specific subset of bacteria. This process happens without changing the overall amount of organic matter in the sediment, but it fundamentally alters the biological quality of the seafloor. The study provides the first evidence in the Caribbean that sea cucumbers can directly influence the growth of staghorn coral, a species that has declined by eighty percent since the 1980s and is now a major focus of restoration efforts.

While the exact mechanism remains to be fully mapped, the data points to a beneficial relationship. The sea cucumber likely releases nutrients in a form that the coral can use, or it changes the local chemistry to make it easier for the coral to grow. The fact that the coral grew faster in the presence of the sea cucumber, even though the total amount of food in the sand stayed the same, suggests that the sea cucumber is making the existing resources more available or useful. This discovery highlights the importance of protecting sea cucumber populations, which are often harvested for food. If these animals are removed from the reef, the delicate balance of nutrient cycling and microbial health they support could be lost, potentially making it harder for corals to recover from damage. The study does not claim to have solved the entire mystery of reef health, but it offers a clear, concrete example of how a small, often ignored creature can play a major role in the survival of one of the ocean's most important habitats.

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