🧬 biology

Brain and blood DNA methylation profiling in Machado-Joseph disease (MJD)/spinocerebellar ataxia type 3 (SCA3)

This study provides the first integrated analysis of DNA methylation in Machado-Joseph disease, revealing that while brain alterations are subtle, region-specific, and enriched for myelination pathways, peripheral blood methylation changes are limited, do not mirror brain findings, and are more pronounced in preclinical carriers.

Luís Teves, Ana Rosa Vieira Melo, Anna J Barget, Ana F Ferreira, Teresa Kay, Sourav Ghosh, Michael A Levy, Jennifer Kerk (…)2026-09-09
🧬 biology

Multimodal profiling establishes ovarian fibrosis as a measurable and targetable hallmark of human reproductive aging

This study establishes ovarian fibrosis as a quantifiable and targetable hallmark of human reproductive aging by integrating multimodal profiling to demonstrate that age-associated ovarian stiffness, driven by a fibroinflammatory stromal program, correlates with reduced fertility and serves as a robust non-invasive biomarker.

Francesca Duncan, Lydia Hughes, Emily Zaniker-Gomez, Pooja Devrukhkar, Subhasri Biswas, Alexis Trofimchuk, Tomiris Atazh (…)2026-09-09
🧬 biology

In silico identification and structural characterization of ClAPRR2 and ClPSY1 as independent genetic targets for a white-rinded, orange-fleshed watermelon (Citrullus lanatus) accessible to colour-vision-deficient consumers

This study utilizes in silico comparative bioinformatics and homology modeling to identify and structurally characterize the independent genes ClAPRR2 and ClPSY1 as promising targets for developing a white-rinded, orange-fleshed watermelon variety that offers enhanced color contrast for consumers with red-green color vision deficiency.

Arnav Nair, Monish Gangadhar Monish, Praful P I Praful P I2026-09-09
🧬 biology

Radial drawdown: a scale-explicit method for identifying movement boundaries in discretely sampled animal tracks

This paper introduces radial drawdown (RD), a scale-explicit method that identifies movement boundaries in discretely sampled animal tracks by detecting the farthest point from a recursively updated origin followed by a retreat, demonstrating superior accuracy and biological relevance compared to existing approaches across various species and movement models.

Haobo Liu, Ke Li2026-09-09
🧬 biology

Coral-Algal Interactions on Coral Patches of Santa Cruz Island, Galápagos-Ecuador

This study assesses coral-algal interactions, benthic composition, and coral health at four shallow sites around Santa Cruz Island, Galápagos, revealing that turf algae dominance and direct contact are significantly associated with reduced coral pigmentation and poorer health, while crustose coralline algae contacts show no visible damage.

Gyuliana Gajardo¹˒², Maria Mónica Lara Uc³, Omar Ruiz-Barzola¹, Emma F. Camp⁴, Eduardo Espinoza⁵, Alberto Proaño⁵, Hecto (…)2026-09-09
🧬 biology

Spatial and single-cell transcriptomics decipher butyrate metabolic reprogramming and its impact on colorectal cancer progression and tumor microenvironment remodeling

This study utilizes spatial and single-cell transcriptomics to identify a low-butrate-metabolizing malignant epithelial subgroup in colorectal cancer associated with poor prognosis and stromal crosstalk, revealing that butyrate suppresses tumor progression by inhibiting the HOXB8/AKT/mTOR axis.

Jiuyuan Fang, Tianqi Liu, Lulu Wen, Miao Qu2026-09-09
🧬 biology

Whole genome identification and analysis of cotton(Gossypium hirsutum L.) pyruvate kinase gene family and functional analysis of GhPK5 gene

This study provides a genome-wide characterization of the 41 pyruvate kinase genes in upland cotton, identifying GhPK5 as a key positive regulator of salt tolerance through its stress-responsive expression and functional validation via gene silencing.

Long Chen, Shan Chen, Bingbing Zhou, Xiaoyue Wang, Shujuan Li, Xue Zhai, Zihao Wei, Liping Ke, Yuqiang Sun2026-09-09
🧬 biology

Proteomic profiling of serum extracellular vesicles in systemic lupus erythematosus shows enrichment of inflammatory cascades, including TNFRSF17, in patients with active disease

This study demonstrates that serum extracellular vesicles from patients with active systemic lupus erythematosus exhibit elevated concentrations and distinct proteomic signatures enriched in inflammatory pathways, with specific overexpression of TNFRSF17 and complement C9 suggesting their potential as biomarkers for disease activity and response to emerging targeted therapies.

Mohd Umar Tabrez, Krista Lundelin, Saara Hämälistö, Laura Pirilä, Christopher Sjöwall, Arno Hänninen2026-09-09