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Skittles: A Multicolor Flow Cytometric Workflow for High-Throughput Characterization of Micro- and Nano-plastics

The paper introduces "Skittles," a high-throughput, multicolor flow cytometric workflow that enables precise, standardized, and quantitative characterization of micro- and nano-plastics in liquid suspensions, offering fluorescence-based discrimination, enumeration, and size distribution analysis validated against microscopy and Raman spectroscopy.

Original authors: Rachel E. Lancaster, Zhe Qiang, Kristina D.A. Mojica

Published 2026-09-22
📖 5 min read🧠 Deep dive

Original authors: Rachel E. Lancaster, Zhe Qiang, Kristina D.A. Mojica

Original paper licensed under CC BY 4.0 (https://creativecommons.org/licenses/by/4.0/). ✨ This is an AI-generated explanation of the paper below. It is not written or endorsed by the authors. For technical accuracy, refer to the original paper. Read full disclaimer

Plastic has become a permanent part of the modern world, valued for its durability and lightness, yet that same resilience allows it to persist in the environment for centuries. Once discarded, these materials do not simply vanish; they break down under the sun, wind, and waves into smaller and smaller fragments. While the visible debris that chokes beaches and harms marine life is well known, a hidden layer of pollution exists in the form of microscopic and nanoscopic particles. These tiny pieces, often invisible to the naked eye, are abundant in oceans and rivers, but scientists have struggled to count them or identify their composition because current methods are slow, labor-intensive, and often miss the smallest particles entirely. Without a way to rapidly and accurately measure this invisible pollution, it remains difficult to understand the true scale of the threat it poses to aquatic ecosystems.

To solve this problem, researchers at the University of Southern Mississippi have developed a new method called Skittles, a workflow designed to count and identify these tiny plastic particles with remarkable speed and precision. The team focused on particles ranging from the size of a grain of sand down to the size of a virus, a scale where traditional counting tools often fail. The core of their approach involves a special dye that sticks to plastic but not to other materials, causing the plastic to glow brightly when exposed to specific light. By combining this glowing dye with a machine that can analyze thousands of individual particles in a liquid stream every second, the researchers created a system that acts like a high-speed sorter. This machine, known as a flow cytometer, uses lasers to detect the light scattered by each particle and the specific color of the glow emitted by the dye, allowing it to distinguish between different types of plastic and estimate their size without needing to look at each one under a microscope.

The researchers tested this method using a variety of plastic types found in nature, including polyethylene, polystyrene, polypropylene, and polyethylene terephthalate, which are common in bottles, packaging, and synthetic fibers. They first optimized the process to ensure the dye worked perfectly, determining the right amount to use and the best way to prepare the samples so that the plastic would glow consistently. They found that heating the samples helped the dye bind more effectively to the plastic, making the signal stronger and more reliable. When they ran their tests, the method proved to be highly accurate, recovering more than 100 percent of the plastic particles they added to the water in controlled experiments, and the counts were consistent with very little variation. To ensure the method was not just counting the dye itself or other debris, they compared the results against a microscope-based count and a chemical analysis technique called Raman spectroscopy, both of which confirmed that the new workflow was identifying the correct materials.

When the team applied this method to real seawater collected from the Mississippi Sound, the results revealed a much denser population of plastic particles than previously estimated. The water contained hundreds of particles in every milliliter, a number that is significantly higher than earlier reports which often focused only on larger, visible fragments. The method successfully identified a mix of plastic types, with polypropylene and polystyrene being the most common, and it was able to measure the size of these particles, showing that they ranged from very small nanoparticles to larger microplastics. The researchers also tested the method on drinking water samples collected from households, where it detected low but measurable amounts of plastic, demonstrating its sensitivity even in clean water with very few particles. Crucially, the study showed that the presence of algae or other natural organic matter in the water did not significantly interfere with the ability to count the plastic, suggesting the method is robust enough for use in complex natural environments.

The significance of this work lies in its ability to turn a slow, difficult task into a rapid, standardized process. Before this development, characterizing the full range of plastic pollution required multiple instruments and days of manual work, often missing the smallest and most numerous particles. The Skittles workflow allows a single instrument to handle the entire job, providing a clear picture of how many particles are present, what kind of plastic they are, and how big they are. While the method currently reports sizes based on a comparison to standard plastic beads, which is a reliable way to estimate size for spherical particles, the researchers note that future work will be needed to refine these size estimates for irregular shapes and different plastic types. Nevertheless, this new tool offers a powerful way to monitor the invisible layer of plastic pollution, providing the data needed to better understand the risks these particles pose to the environment and to track how pollution levels change over time.

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